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• 16:06, 10 May 2022 Admin talk contribs created page Ammm:MM/PBSA with amber: theory and application (Created page with "= Introduction = MM-PBSA method implemented in AMBER is to calculate the binding free energy for the association of two proteins or protein-ligand interation. It represents the postprocessing method to evaluate free energies of binding or to calculate absolute or relative free energies of molecules in solution.The sets of structures are usually collected with molecular dynamics or Monte Carlo methods. The first application of this model in its present form was to study t...")